. DC is always from negative and to positive.
So we are led to believe. However it's not entirely true.
You have an example applicable to these bikes of when it is not?
You have taken what I said out of context.
Not intentionally. However, this thread was started by
@Sundance looking for help to solve an apparent misfiring problem.
There are 2 negatives out of the box.
Yes and no.
The Box White wire is not "out of", it is for the the negative supply from the battery -ve. Unlike, say, the ignition switch, the Box will not work if you connect the Black wire to battery -ve and the White wire to a/the coil -ve.
You have assumed
that's how he has connected it.
It doesn't run
Post #1:-
I got it started and took it for a brief spin.
... again, you should read the whole thread ...
If the engine starts and the bike is rideable, the Boyer Box can only be connected correctly.
The o.p. started this thread because bike has
since developed a misfire.
. Incorrect. The Transistor Box Red wire is nothing to do with any coil/s connected to the Transistor Box Black wire.
Never said it did.
Red (coil supply) to batt neg
... and:-
the Transistor Box Red wire is always connected to battery +ve
Positive earth electrics (as on the o.p.'s bike), ideally the Transistor Box Red wire should be connected directly to the battery +ve terminal.
As long as voltage drop is adequately dealt with
As voltage drop would signify additional resistance and the Box electronics only draw about 250mA, there simply cannot be noticeable resistance between battery +ve and the Box.
This is another reason why it is unwise to connect the Box Red to a coil +ve terminal and then connect that to something other than the battery +ve terminal itself - increased opportunities for unwanted resistance to exist or develop.
The whole point of using an "earth" system whether negative or positive, is it uses the vehicle as a capacitor.
A capacitor stores electricity from a charger then discharges it due to trigger, so you kind of hope not ...
Even if it was true, any Lucas or pattern wiring loom has a network of "earth" wires. This is far more long-term reliable than using a motorcycle frame and other cycle parts.
trying to ascertain why the bike isn't firing and why it was running rough before coil changes. I have a hunch it's the ignition switch causing a massive voltage drop.
But, as posted already, the engine is firing and the o.p. has ridden the bike, it has only
developed the intermittent misfire since. While I agree the ignition switch
could be a cause, that the o.p. has posted the misfire develops irrespective of whether the Box is supplied through the ignition switch or directly from the battery -ve terminal - bypassing the ignition switch (and all other loom wiring) - currently points away from the ignition switch
is the cause of the misfire.
Resistance across both primary's should be in the order of 4-6 ohms (6V coils wired in series).
Original Lucas 12V coils fitted with points had/have a primary resistance of about 3.5 Ohms. When the Boyer (and Lucas Rita) were developed in the later 1960's-early 1970's, points were what they were developed to replace. Multiple electrical components connected in series, their resistances are cumulative - then original Lucas 6V coils had a primary resistance of about 1.8 Ohms, so two connected in series are nearly 3.5 Ohms.
The reason for 3.5 Ohms is a nominal 12V across 3.5 Ohms, the coil/s will draw approximately 3.5 Amps. From
the Boyer fitting instructions for a Triumph twin with 12V electrics:-
General Data
3) The maximum ignition coil current through the unit must not exceed 5 amps (Total Ignition coil resistance should be a minimum of 3.5 Ohms
4) For low compression engines, two 12 volt coils (4 Ohm Resistance) in series are satisfactory, but for racing and high compression engines two 6 volt coils (2 Ohm resistance) in series, or one 12 volt 3.5 ohm or more primary winding resistance dual output coil will give the best results.
Two "6V" coils connected in series, 4 Ohms total primary resistance is fine. However, increasing primary resistance reduces Amps drawn; as high as 6 Ohms, nominal 12V across the combination, it will draw just 2 Amps.

High coil primary resistance causing low Amps draw has been a well known cause of misfiring problems, especially at higher rpm, for well over forty years to my certain knowledge.
"Lucas" is now just a name used by Wassell on the electrical components it has made in low-wage Far Eastern countries. It is well known already that current new "Lucas" "6V" coils have much too high primary resistance to be used with any e.i. without problems.
The only coils with the correct primary resistance (12V 3.5 Ohm, 6V 1.8 Ohm, 4V 1.2 Ohm) and with backup if they go wrong are PVL and Tri-Spark.